ACCESS Resource Provider Software Discovery

aocc v2.3.0

Module: aocc/2.3.0

The AOCC compiler system is a high performance, production quality code generation tool. The AOCC environment provides various options to developers when building and optimizing C, C++, and Fortran applications targeting 32-bit and 64-bit Linux platforms. The AOCC compiler system offers a high level of advanced optimizations, multi-threading and processor support that includes global optimization, vectorization, inter-procedural analyses, loop transformations, and code generation. AMD also provides highly o

Domain: compilers

Keywords: clang clang++ flang AMD

CP2K v8.1

Module: CP2K/8.1

CP2K is a quantum chemistry and solid state physics software package that can perform atomistic simulations of solid state, liquid, molecular, periodic, material, crystal, and biological systems.

Domain: Quantum Chemistry Materials Sciences

Keywords: molecular dynamics ab initio

openblas v0.3.12

Module: openblas/0.3.12

OpenBLAS: An optimized BLAS library

Domain: libraries

Keywords: BLAS GNU

dealii v9.3.1

Module: dealii/9.3.1

The dealii/9.3.1 modulefile defines the default system paths and environment variables needed to use the contents of the dealii/9.3.1 package. Deal.ii FE solver is a very popular open source FE solver.

Domain: Utility

gettext v0.22.5-gcc13.2.1-p20240113

Module: gettext/0.22.5-gcc13.2.1-p20240113

cutadapt v2.10

Module: cutadapt/2.10

cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.

Domain: Biological Sciences

Keywords: singularity bioinformatics

hdf5 v1.12.0

Module: hdf5/1.12.0

HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data.

Domain: I/O libraries

Keywords: HDF hdf5 data file format

openblas v0.3.13

Module: openblas/0.3.13

OpenBLAS: An optimized BLAS library

Domain: libraries

Keywords: BLAS GNU

asciinema v2.1.0

Module: asciinema/2.1.0

asciinema is a free and open source solution for recording terminal sessions and sharing them on the web.

Domain: Other

Keywords: singularity utilities

lmod.lua vundefined

Module: lmod.lua/undefined

Lmod: An Environment Module System

intel-debugger v2023.2.0

Module: intel-debugger/2023.2.0

BEDOPS v2.4.39

Module: BEDOPS/2.4.39

BEDOPS is an open-source command-line toolkit that performs highly efficient and scalable Boolean and other set operations, statistical calculations, archiving, conversion and other management of genomic data of arbitrary scale. Tasks can be easily split by chromosome for distributing whole-genome analyses across a computational cluster.

Domain: Biological Sciences

Keywords: singularity bioinformatics

aocc v4.2.0

Module: aocc/4.2.0

AOCC loads AOCC compiler setup

NanoPlot v1.42.0

Module: NanoPlot/1.42.0

Plotting scripts for long read sequencing data.

Domain: Biological Sciences

Keywords: singularity bioinformatics

asciinema v2.0.2

Module: asciinema/2.0.2

asciinema is a free and open source solution for recording terminal sessions and sharing them on the web.

Domain: Other

Keywords: singularity utilities

dorado v0.6.0

Module: dorado/0.6.0

Oxford Nanopore's Basecaller.

Domain: Biological Sciences

Keywords: singularity bioinformatics

canu v1.5

Module: canu/1.5

A single molecule sequence assembler for genomes large and small.

Domain: Utilities

Keywords: singularity bioinformatics

openmpi v3.1.5-nvhpc21.2

Module: openmpi/3.1.5-nvhpc21.2

Purpose ------- The modulefile defines paths and environment variables for using OpenMPI 3.1.5 built with the NVidia HPC SDK 21.2 compilers.

Domain: libraries

Allocations v1.0

Module: Allocations/1.0

Path to SU usage and shell change utilities.

checkm v1.1.3

Module: checkm/1.1.3

CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.

Domain: Biological Sciences

Keywords: singularity bioinformatics

intel-compiler-rt v2023.2.1

Module: intel-compiler-rt/2023.2.1

ncdu v1.15.1

Module: ncdu/1.15.1

Ncdu is a disk usage analyzer with an ncurses interface.

Domain: Other

LAMMPS v22Jul25-gcc

Module: LAMMPS/22Jul25-gcc

Classical molecular dynamics.

Domain: Materials Sciences

Keywords: molecular dynamics

LAMMPS v3Mar20

Module: LAMMPS/3Mar20

Classical molecular dynamics.

Domain: Materials Sciences

Keywords: molecular dynamics

visidata v2.11

Module: visidata/2.11

VisiData is an interactive multitool for tabular data.

Domain: Other