ACCESS Resource Provider Software Discovery

OpenSlide v3.4.1

Module: OpenSlide/3.4.1

OpenSlide is a vendor-neutral software foundation for digital pathology that supports various slide formats.

Domain: Other

Keywords: singularity utilities image-processing

OpenSlide v4.0.0

Module: OpenSlide/4.0.0

OpenSlide is a vendor-neutral software foundation for digital pathology that supports various slide formats.

Domain: Other

Keywords: singularity utilities image-processing

LAMMPS v22Jul25-gcc

Module: LAMMPS/22Jul25-gcc

Classical molecular dynamics.

Domain: Materials Sciences

Keywords: molecular dynamics

intel-inspector v2023.2.0

Module: intel-inspector/2023.2.0

infernal v1.1.3

Module: infernal/1.1.3

Infernal (INFERence of RNA ALignment) is for searching DNA sequence databases for RNA structure and sequence similarities.

Domain: Biological Sciences

Keywords: singularity bioinformatics

fftw v3.3.8

Module: fftw/3.3.8

FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data (as well as of even/odd data, i.e. the discrete cosine/sine transforms or DCT/DST). We believe that FFTW, which is free software, should become the FFT library of choice for most applications.

Domain: libraries

Keywords: FFTW MPI

QuantumEspresso v7.0

Module: QuantumEspresso/7.0

Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft).

Domain: Materials Sciences

Keywords: DFT ab initio pseudopotential

ncdu v2.5

Module: ncdu/2.5

Ncdu is a disk usage analyzer with an ncurses interface.

Domain: Other

prodigal v2.6.3

Module: prodigal/2.6.3

Fast, reliable protein-coding gene prediction for prokaryotic genomes.

Domain: Biological Sciences

Keywords: singularity bioinformatics

comsol v6.4

Module: comsol/6.4

The comsol/6.4 modulefile defines the default system paths and environment variables needed to use the contents of the comsol/6.4 package.

Domain: Finite elements

hdf5 v1.12.0

Module: hdf5/1.12.0

HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data.

Domain: I/O libraries

Keywords: HDF hdf5 data file format

intel-dal v2023.2.0

Module: intel-dal/2023.2.0

hisat2 v2.2.1

Module: hisat2/2.2.1

HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) to a population of human genomes as well as to a single reference genome.

Domain: Biological Sciences

BEDOPS v2.4.39

Module: BEDOPS/2.4.39

BEDOPS is an open-source command-line toolkit that performs highly efficient and scalable Boolean and other set operations, statistical calculations, archiving, conversion and other management of genomic data of arbitrary scale. Tasks can be easily split by chromosome for distributing whole-genome analyses across a computational cluster.

Domain: Biological Sciences

Keywords: singularity bioinformatics

intel-ippcp-ia32 v2021.8.0

Module: intel-ippcp-ia32/2021.8.0

cuda v12.4.0

Module: cuda/12.4.0

aocc v5.0.0

Module: aocc/5.0.0

AOCC loads AOCC compiler setup

ansys v212

Module: ansys/212

The ansys installation includes ANSYS multiphysics components. Paths to ANSYS mechanical, Fluent, CFX and AutoDyn packages are added to the user path setting. The software is distributed by ANSYS, Inc: http://ansys.com

Domain: Engineering

prokka v1.14.5

Module: prokka/1.14.5

prokka is a software tool to annotate bacterial, archaeal and viral genomes quickly and produce standards-compliant output files.

Domain: Biological Sciences

Keywords: singularity bioinformatics

ansys v201

Module: ansys/201

The ansys installation includes ANSYS multiphysics components. Paths to ANSYS mechanical, Fluent, CFX and AutoDyn packages are added to the user path setting. The software is distributed by ANSYS, Inc: http://ansys.com

Domain: Engineering

opencv v4.2.0

Module: opencv/4.2.0

OpenCV is released under a BSD license and hence it's free for both academic and commercial use. It has C++, C, Python and Java interfaces and supports Windows, Linux, Mac OS, iOS and Android. OpenCV was designed for computational efficiency and with a strong focus on real-time applications. Written in optimized C/C++, the library can take advantage of multi-core processing. Enabled with OpenCL, it can take advantage of the hardware acceleration of the underlying heterogeneous compute platform. Adopted all

Domain: Libraries/vision

rclone v1.55.1

Module: rclone/1.55.1

rclone is a command line program to manage files on cloud storage.

Domain: Other

gaussian vG16_RevC01

Module: gaussian/G16_RevC01

Gaussian 16 Revision C.01 ------------------------ Please see example job script at /opt/packages/examples/gaussian/

Domain: Chemistry

comsol v6.2

Module: comsol/6.2

The comsol/6.2 modulefile defines the default system paths and environment variables needed to use the contents of the comsol/6.2 package.

Domain: Finite elements

openblas v0.3.13

Module: openblas/0.3.13

OpenBLAS: An optimized BLAS library

Domain: libraries

Keywords: BLAS GNU